Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Gm37055-201ENSMUST00000191866 133 ntBASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retreg2Q6NS82 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retreg2Q6NS82 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.77■□□□□ 0.59
Retreg2Q6NS82 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retreg2Q6NS82 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retreg2Q6NS82 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retreg2Q6NS82 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retreg2Q6NS82 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Gm22325-201ENSMUST00000158904 308 ntBASIC18.74■□□□□ 0.59
Retreg2Q6NS82 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retreg2Q6NS82 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg2Q6NS82 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg2Q6NS82 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg2Q6NS82 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg2Q6NS82 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg2Q6NS82 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg2Q6NS82 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retreg2Q6NS82 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms