Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scube3Q66PY1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.34■□□□□ 0.53
Scube3Q66PY1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Gm21814-202ENSMUST00000203277 873 ntBASIC18.34■□□□□ 0.53
Scube3Q66PY1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Gm5417-201ENSMUST00000079706 384 ntBASIC18.34■□□□□ 0.53
Scube3Q66PY1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scube3Q66PY1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scube3Q66PY1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Scube3Q66PY1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.33■□□□□ 0.53
Scube3Q66PY1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scube3Q66PY1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scube3Q66PY1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scube3Q66PY1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Scube3Q66PY1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Odf3b-204ENSMUST00000227834 930 ntBASIC18.32■□□□□ 0.52
Scube3Q66PY1 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.32■□□□□ 0.52
Scube3Q66PY1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.32■□□□□ 0.52
Scube3Q66PY1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scube3Q66PY1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Gm24841-201ENSMUST00000158676 357 ntBASIC18.31■□□□□ 0.52
Scube3Q66PY1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.31■□□□□ 0.52
Scube3Q66PY1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scube3Q66PY1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Gm3375-201ENSMUST00000203929 796 ntBASIC18.3■□□□□ 0.52
Scube3Q66PY1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scube3Q66PY1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scube3Q66PY1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scube3Q66PY1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scube3Q66PY1 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.29■□□□□ 0.52
Scube3Q66PY1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.29■□□□□ 0.52
Scube3Q66PY1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Scube3Q66PY1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scube3Q66PY1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.29■□□□□ 0.52
Scube3Q66PY1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scube3Q66PY1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Scube3Q66PY1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scube3Q66PY1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scube3Q66PY1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms