Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.29□□□□□ -0.12
Tgfbr1Q64729 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.29□□□□□ -0.12
Tgfbr1Q64729 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Idnk-204ENSMUST00000226010 1898 ntBASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tgfbr1Q64729 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tgfbr1Q64729 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tgfbr1Q64729 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tgfbr1Q64729 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Gm8969-201ENSMUST00000199694 526 ntBASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Gm7514-201ENSMUST00000209475 934 ntBASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tgfbr1Q64729 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tgfbr1Q64729 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms