Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.94■□□□□ 0.46
Six1Q62231 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.94■□□□□ 0.46
Six1Q62231 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Six1Q62231 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.94■□□□□ 0.46
Six1Q62231 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Six1Q62231 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.94■□□□□ 0.46
Six1Q62231 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.94■□□□□ 0.46
Six1Q62231 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Six1Q62231 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Six1Q62231 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.93■□□□□ 0.46
Six1Q62231 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.93■□□□□ 0.46
Six1Q62231 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Gm12933-201ENSMUST00000120203 872 ntBASIC17.93■□□□□ 0.46
Six1Q62231 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Gm10138-203ENSMUST00000206952 366 ntBASIC17.93■□□□□ 0.46
Six1Q62231 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Six1Q62231 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.93■□□□□ 0.46
Six1Q62231 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six1Q62231 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six1Q62231 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Six1Q62231 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six1Q62231 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.92■□□□□ 0.46
Six1Q62231 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Six1Q62231 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.92■□□□□ 0.46
Six1Q62231 Gm4968-201ENSMUST00000071458 858 ntBASIC17.92■□□□□ 0.46
Six1Q62231 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six1Q62231 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six1Q62231 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Six1Q62231 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Six1Q62231 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Six1Q62231 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.91■□□□□ 0.46
Six1Q62231 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Six1Q62231 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.91■□□□□ 0.46
Six1Q62231 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Gm15375-201ENSMUST00000119510 849 ntBASIC17.91■□□□□ 0.46
Six1Q62231 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.91■□□□□ 0.46
Six1Q62231 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.91■□□□□ 0.46
Six1Q62231 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.91■□□□□ 0.46
Six1Q62231 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.91■□□□□ 0.46
Six1Q62231 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Six1Q62231 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Six1Q62231 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Six1Q62231 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.9■□□□□ 0.46
Six1Q62231 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Six1Q62231 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Gm11249-201ENSMUST00000117071 859 ntBASIC17.9■□□□□ 0.46
Six1Q62231 Gm13216-201ENSMUST00000117145 591 ntBASIC17.9■□□□□ 0.46
Six1Q62231 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Gm2559-201ENSMUST00000201323 363 ntBASIC17.9■□□□□ 0.46
Six1Q62231 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Six1Q62231 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.9■□□□□ 0.46
Six1Q62231 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Six1Q62231 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Six1Q62231 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Six1Q62231 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.89■□□□□ 0.45
Six1Q62231 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.89■□□□□ 0.45
Six1Q62231 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Gm6576-201ENSMUST00000169678 883 ntBASIC17.89■□□□□ 0.45
Six1Q62231 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Six1Q62231 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Six1Q62231 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms