Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
VcanQ62059 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
VcanQ62059 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
VcanQ62059 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
VcanQ62059 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VcanQ62059 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VcanQ62059 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
VcanQ62059 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
VcanQ62059 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.46■□□□□ 0.22
VcanQ62059 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VcanQ62059 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
VcanQ62059 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
VcanQ62059 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
VcanQ62059 Gm26039-201ENSMUST00000158152 144 ntBASIC16.45■□□□□ 0.22
VcanQ62059 Mir5126-201ENSMUST00000175513 77 ntBASIC16.45■□□□□ 0.22
VcanQ62059 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.45■□□□□ 0.22
VcanQ62059 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.45■□□□□ 0.22
VcanQ62059 Gm27321-201ENSMUST00000185021 205 ntBASIC16.45■□□□□ 0.22
VcanQ62059 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VcanQ62059 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VcanQ62059 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Gm25911-201ENSMUST00000157621 56 ntBASIC16.44■□□□□ 0.22
VcanQ62059 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.44■□□□□ 0.22
VcanQ62059 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.44■□□□□ 0.22
VcanQ62059 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.44■□□□□ 0.22
VcanQ62059 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VcanQ62059 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VcanQ62059 Gm11779-201ENSMUST00000118541 368 ntBASIC16.43■□□□□ 0.22
VcanQ62059 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.43■□□□□ 0.22
VcanQ62059 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.43■□□□□ 0.22
VcanQ62059 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.43■□□□□ 0.22
VcanQ62059 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VcanQ62059 Gm15467-201ENSMUST00000120582 445 ntBASIC16.43■□□□□ 0.22
VcanQ62059 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VcanQ62059 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Gm12895-201ENSMUST00000122214 226 ntBASIC16.42■□□□□ 0.22
VcanQ62059 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Mir5131-201ENSMUST00000175426 93 ntBASIC16.42■□□□□ 0.22
VcanQ62059 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VcanQ62059 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VcanQ62059 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VcanQ62059 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.41■□□□□ 0.22
VcanQ62059 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.41■□□□□ 0.22
VcanQ62059 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VcanQ62059 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VcanQ62059 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms