Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Foxj1Q61660 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxj1Q61660 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxj1Q61660 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxj1Q61660 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Foxj1Q61660 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Foxj1Q61660 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Foxj1Q61660 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Foxj1Q61660 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Foxj1Q61660 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Foxj1Q61660 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.7■□□□□ 0.42
Foxj1Q61660 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.7■□□□□ 0.42
Foxj1Q61660 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.7■□□□□ 0.42
Foxj1Q61660 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Foxj1Q61660 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
Foxj1Q61660 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.69■□□□□ 0.42
Foxj1Q61660 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.69■□□□□ 0.42
Foxj1Q61660 Gm7284-201ENSMUST00000131667 944 ntBASIC17.69■□□□□ 0.42
Foxj1Q61660 Gm25016-201ENSMUST00000158399 131 ntBASIC17.69■□□□□ 0.42
Foxj1Q61660 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Gm38027-201ENSMUST00000192315 235 ntBASIC17.69■□□□□ 0.42
Foxj1Q61660 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Foxj1Q61660 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Foxj1Q61660 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Foxj1Q61660 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Foxj1Q61660 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Foxj1Q61660 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Gm10418-201ENSMUST00000100943 576 ntBASIC17.68■□□□□ 0.42
Foxj1Q61660 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.68■□□□□ 0.42
Foxj1Q61660 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
Foxj1Q61660 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Foxj1Q61660 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.68■□□□□ 0.42
Foxj1Q61660 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Foxj1Q61660 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Foxj1Q61660 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.67■□□□□ 0.42
Foxj1Q61660 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Foxj1Q61660 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Foxj1Q61660 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.67■□□□□ 0.42
Foxj1Q61660 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.66■□□□□ 0.42
Foxj1Q61660 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Foxj1Q61660 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Foxj1Q61660 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Foxj1Q61660 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.66■□□□□ 0.42
Foxj1Q61660 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Foxj1Q61660 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Foxj1Q61660 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Foxj1Q61660 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms