Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Foxc1Q61572 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.82□□□□□ -0.36
Foxc1Q61572 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.82□□□□□ -0.36
Foxc1Q61572 Gm43930-201ENSMUST00000203868 845 ntBASIC12.82□□□□□ -0.36
Foxc1Q61572 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Foxc1Q61572 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Foxc1Q61572 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Foxc1Q61572 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Foxc1Q61572 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.81□□□□□ -0.36
Foxc1Q61572 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.81□□□□□ -0.36
Foxc1Q61572 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.81□□□□□ -0.36
Foxc1Q61572 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.81□□□□□ -0.36
Foxc1Q61572 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Foxc1Q61572 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Foxc1Q61572 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.8□□□□□ -0.36
Foxc1Q61572 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.8□□□□□ -0.36
Foxc1Q61572 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.8□□□□□ -0.36
Foxc1Q61572 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Gm44882-201ENSMUST00000205702 802 ntBASIC12.8□□□□□ -0.36
Foxc1Q61572 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.8□□□□□ -0.36
Foxc1Q61572 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.8□□□□□ -0.36
Foxc1Q61572 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Foxc1Q61572 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.8□□□□□ -0.36
Foxc1Q61572 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Foxc1Q61572 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.79□□□□□ -0.36
Foxc1Q61572 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.79□□□□□ -0.36
Foxc1Q61572 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Foxc1Q61572 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.79□□□□□ -0.36
Foxc1Q61572 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.79□□□□□ -0.36
Foxc1Q61572 Gm5643-201ENSMUST00000117081 966 ntBASIC12.79□□□□□ -0.36
Foxc1Q61572 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Foxc1Q61572 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Foxc1Q61572 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms