Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Ecm1Q61508 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ecm1Q61508 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ecm1Q61508 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ecm1Q61508 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ecm1Q61508 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.39■□□□□ 0.69
Ecm1Q61508 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ecm1Q61508 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Gm6623-201ENSMUST00000173570 544 ntBASIC19.39■□□□□ 0.69
Ecm1Q61508 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Ecm1Q61508 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.39■□□□□ 0.69
Ecm1Q61508 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ecm1Q61508 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.39■□□□□ 0.69
Ecm1Q61508 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Mir770-201ENSMUST00000103252 94 ntBASIC19.38■□□□□ 0.69
Ecm1Q61508 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.38■□□□□ 0.69
Ecm1Q61508 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Gm27357-201ENSMUST00000183754 135 ntBASIC19.38■□□□□ 0.69
Ecm1Q61508 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.38■□□□□ 0.69
Ecm1Q61508 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.38■□□□□ 0.69
Ecm1Q61508 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ecm1Q61508 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.37■□□□□ 0.69
Ecm1Q61508 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.37■□□□□ 0.69
Ecm1Q61508 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 Gm7153-201ENSMUST00000117092 455 ntBASIC19.37■□□□□ 0.69
Ecm1Q61508 Mir3081-201ENSMUST00000175305 84 ntBASIC19.37■□□□□ 0.69
Ecm1Q61508 Gm27742-201ENSMUST00000184667 60 ntBASIC19.37■□□□□ 0.69
Ecm1Q61508 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ecm1Q61508 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ecm1Q61508 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.36■□□□□ 0.69
Ecm1Q61508 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.36■□□□□ 0.69
Ecm1Q61508 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ecm1Q61508 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ecm1Q61508 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ecm1Q61508 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.36■□□□□ 0.69
Ecm1Q61508 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ecm1Q61508 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Ecm1Q61508 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ecm1Q61508 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ecm1Q61508 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ecm1Q61508 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.35■□□□□ 0.69
Ecm1Q61508 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.35■□□□□ 0.69
Ecm1Q61508 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ecm1Q61508 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ecm1Q61508 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ecm1Q61508 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.34■□□□□ 0.69
Ecm1Q61508 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.34■□□□□ 0.69
Ecm1Q61508 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ecm1Q61508 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Ecm1Q61508 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ecm1Q61508 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.34■□□□□ 0.69
Ecm1Q61508 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms