Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Traf4Q61382 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Traf4Q61382 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Traf4Q61382 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.47■□□□□ 0.07
Traf4Q61382 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Traf4Q61382 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Traf4Q61382 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Gm715-201ENSMUST00000117865 831 ntBASIC15.47■□□□□ 0.07
Traf4Q61382 Gm11927-201ENSMUST00000118472 759 ntBASIC15.47■□□□□ 0.07
Traf4Q61382 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Traf4Q61382 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.47■□□□□ 0.07
Traf4Q61382 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Traf4Q61382 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.47■□□□□ 0.07
Traf4Q61382 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Traf4Q61382 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Traf4Q61382 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Traf4Q61382 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.46■□□□□ 0.07
Traf4Q61382 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Traf4Q61382 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.46■□□□□ 0.07
Traf4Q61382 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.46■□□□□ 0.07
Traf4Q61382 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.46■□□□□ 0.07
Traf4Q61382 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Traf4Q61382 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Traf4Q61382 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Traf4Q61382 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.45■□□□□ 0.06
Traf4Q61382 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Traf4Q61382 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Traf4Q61382 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.45■□□□□ 0.06
Traf4Q61382 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.45■□□□□ 0.06
Traf4Q61382 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.45■□□□□ 0.06
Traf4Q61382 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Traf4Q61382 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Traf4Q61382 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Traf4Q61382 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.44■□□□□ 0.06
Traf4Q61382 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Dancr-204ENSMUST00000132389 2347 ntBASIC15.44■□□□□ 0.06
Traf4Q61382 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Traf4Q61382 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.44■□□□□ 0.06
Traf4Q61382 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Traf4Q61382 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Traf4Q61382 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.44■□□□□ 0.06
Traf4Q61382 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms