Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a1Q61245 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a1Q61245 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a1Q61245 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col11a1Q61245 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col11a1Q61245 Gm37935-201ENSMUST00000192012 982 ntBASIC19.63■□□□□ 0.73
Col11a1Q61245 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col11a1Q61245 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col11a1Q61245 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col11a1Q61245 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col11a1Q61245 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col11a1Q61245 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col11a1Q61245 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col11a1Q61245 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.62■□□□□ 0.73
Col11a1Q61245 Gm11336-201ENSMUST00000118168 334 ntBASIC19.62■□□□□ 0.73
Col11a1Q61245 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Gm10052-201ENSMUST00000168019 960 ntBASIC19.62■□□□□ 0.73
Col11a1Q61245 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.62■□□□□ 0.73
Col11a1Q61245 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col11a1Q61245 Gm7729-201ENSMUST00000050143 801 ntBASIC19.62■□□□□ 0.73
Col11a1Q61245 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.62■□□□□ 0.73
Col11a1Q61245 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col11a1Q61245 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col11a1Q61245 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col11a1Q61245 Mir5126-201ENSMUST00000175513 77 ntBASIC19.61■□□□□ 0.73
Col11a1Q61245 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col11a1Q61245 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col11a1Q61245 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col11a1Q61245 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Col11a1Q61245 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.61■□□□□ 0.73
Col11a1Q61245 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44357-201ENSMUST00000195897 142 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm19658-201ENSMUST00000196231 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44367-201ENSMUST00000196836 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44350-201ENSMUST00000197197 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44390-201ENSMUST00000197533 144 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44313-201ENSMUST00000198018 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44486-201ENSMUST00000198508 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44454-201ENSMUST00000198541 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44314-201ENSMUST00000199263 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44394-201ENSMUST00000199558 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44484-201ENSMUST00000199873 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44466-201ENSMUST00000200264 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm44359-201ENSMUST00000200671 138 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm15372-201ENSMUST00000120729 834 ntBASIC19.6■□□□□ 0.73
Col11a1Q61245 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.6■□□□□ 0.73
Col11a1Q61245 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.6■□□□□ 0.73
Col11a1Q61245 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col11a1Q61245 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.59■□□□□ 0.73
Col11a1Q61245 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col11a1Q61245 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Col11a1Q61245 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col11a1Q61245 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col11a1Q61245 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col11a1Q61245 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.59■□□□□ 0.73
Col11a1Q61245 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.59■□□□□ 0.73
Col11a1Q61245 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.59■□□□□ 0.73
Col11a1Q61245 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col11a1Q61245 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col11a1Q61245 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col11a1Q61245 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.58■□□□□ 0.73
Col11a1Q61245 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.58■□□□□ 0.73
Col11a1Q61245 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.58■□□□□ 0.73
Col11a1Q61245 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col11a1Q61245 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.58■□□□□ 0.73
Col11a1Q61245 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.58■□□□□ 0.73
Col11a1Q61245 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col11a1Q61245 Idnk-204ENSMUST00000226010 1898 ntBASIC19.58■□□□□ 0.73
Col11a1Q61245 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col11a1Q61245 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a1Q61245 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a1Q61245 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a1Q61245 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.58■□□□□ 0.72
Col11a1Q61245 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col11a1Q61245 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms