Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sim1Q61045 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sim1Q61045 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sim1Q61045 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sim1Q61045 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sim1Q61045 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sim1Q61045 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sim1Q61045 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sim1Q61045 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Sim1Q61045 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Sim1Q61045 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sim1Q61045 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sim1Q61045 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
Sim1Q61045 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.33■□□□□ 0.36
Sim1Q61045 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.33■□□□□ 0.36
Sim1Q61045 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sim1Q61045 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sim1Q61045 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sim1Q61045 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sim1Q61045 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.32■□□□□ 0.36
Sim1Q61045 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Sim1Q61045 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.32■□□□□ 0.36
Sim1Q61045 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sim1Q61045 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sim1Q61045 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sim1Q61045 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Sim1Q61045 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Sim1Q61045 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.31■□□□□ 0.36
Sim1Q61045 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sim1Q61045 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.31■□□□□ 0.36
Sim1Q61045 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.31■□□□□ 0.36
Sim1Q61045 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sim1Q61045 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sim1Q61045 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.31■□□□□ 0.36
Sim1Q61045 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sim1Q61045 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sim1Q61045 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.3■□□□□ 0.36
Sim1Q61045 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.3■□□□□ 0.36
Sim1Q61045 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Gm18032-201ENSMUST00000222541 538 ntBASIC17.3■□□□□ 0.36
Sim1Q61045 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sim1Q61045 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sim1Q61045 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sim1Q61045 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sim1Q61045 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sim1Q61045 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sim1Q61045 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.29■□□□□ 0.36
Sim1Q61045 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sim1Q61045 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sim1Q61045 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.29■□□□□ 0.36
Sim1Q61045 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.29■□□□□ 0.36
Sim1Q61045 Ank2-226ENSMUST00000189368 339 ntBASIC17.29■□□□□ 0.36
Sim1Q61045 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.29■□□□□ 0.36
Sim1Q61045 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.29■□□□□ 0.36
Sim1Q61045 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sim1Q61045 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Sim1Q61045 Rarb-207ENSMUST00000225921 2756 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms