Protein–RNA interactions for Protein: Q60934

Grik1, Glutamate receptor ionotropic, kainate 1, mousemouse

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Grik1Q60934 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Grik1Q60934 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Grik1Q60934 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Grik1Q60934 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.36■□□□□ 0.53
Grik1Q60934 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Grik1Q60934 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Grik1Q60934 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Grik1Q60934 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.36■□□□□ 0.53
Grik1Q60934 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Grik1Q60934 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.36■□□□□ 0.53
Grik1Q60934 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.36■□□□□ 0.53
Grik1Q60934 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.36■□□□□ 0.53
Grik1Q60934 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.36■□□□□ 0.53
Grik1Q60934 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Grik1Q60934 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Grik1Q60934 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Grik1Q60934 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.36■□□□□ 0.53
Grik1Q60934 Gm7367-201ENSMUST00000057611 492 ntBASIC18.36■□□□□ 0.53
Grik1Q60934 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Grik1Q60934 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Grik1Q60934 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.36■□□□□ 0.53
Grik1Q60934 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Grik1Q60934 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.35■□□□□ 0.53
Grik1Q60934 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Grik1Q60934 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.35■□□□□ 0.53
Grik1Q60934 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Grik1Q60934 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Grik1Q60934 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.34■□□□□ 0.53
Grik1Q60934 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.34■□□□□ 0.53
Grik1Q60934 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Gm10819-201ENSMUST00000099988 561 ntBASIC18.34■□□□□ 0.53
Grik1Q60934 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Grik1Q60934 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Grik1Q60934 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Grik1Q60934 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Grik1Q60934 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.33■□□□□ 0.53
Grik1Q60934 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Grik1Q60934 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Grik1Q60934 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Grik1Q60934 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
Grik1Q60934 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Grik1Q60934 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.33■□□□□ 0.52
Grik1Q60934 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Grik1Q60934 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Fst-202ENSMUST00000223640 2612 ntBASIC18.33■□□□□ 0.52
Grik1Q60934 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Grik1Q60934 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Grik1Q60934 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.32■□□□□ 0.52
Grik1Q60934 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Grik1Q60934 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.32■□□□□ 0.52
Grik1Q60934 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Grik1Q60934 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.32■□□□□ 0.52
Grik1Q60934 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Grik1Q60934 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.32■□□□□ 0.52
Grik1Q60934 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Grik1Q60934 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Grik1Q60934 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Grik1Q60934 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Grik1Q60934 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Grik1Q60934 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Grik1Q60934 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms