Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Slc6a4Q60857 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a4Q60857 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slc6a4Q60857 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Slc6a4Q60857 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.89■□□□□ 0.45
Slc6a4Q60857 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.89■□□□□ 0.45
Slc6a4Q60857 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a4Q60857 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.88■□□□□ 0.45
Slc6a4Q60857 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Slc6a4Q60857 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a4Q60857 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a4Q60857 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a4Q60857 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.87■□□□□ 0.45
Slc6a4Q60857 Gm18959-201ENSMUST00000208954 655 ntBASIC17.87■□□□□ 0.45
Slc6a4Q60857 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.87■□□□□ 0.45
Slc6a4Q60857 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.87■□□□□ 0.45
Slc6a4Q60857 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a4Q60857 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.87■□□□□ 0.45
Slc6a4Q60857 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.86■□□□□ 0.45
Slc6a4Q60857 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.86■□□□□ 0.45
Slc6a4Q60857 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Gm2274-201ENSMUST00000184539 609 ntBASIC17.85■□□□□ 0.45
Slc6a4Q60857 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a4Q60857 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms