Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm43438-201ENSMUST00000198133 379 ntBASIC17.33■□□□□ 0.36
Col12a1Q60847 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col12a1Q60847 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Col12a1Q60847 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.32■□□□□ 0.36
Col12a1Q60847 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Gm2756-201ENSMUST00000195851 400 ntBASIC17.32■□□□□ 0.36
Col12a1Q60847 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.32■□□□□ 0.36
Col12a1Q60847 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.32■□□□□ 0.36
Col12a1Q60847 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.32■□□□□ 0.36
Col12a1Q60847 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.32■□□□□ 0.36
Col12a1Q60847 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.32■□□□□ 0.36
Col12a1Q60847 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col12a1Q60847 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm11779-201ENSMUST00000118541 368 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44357-201ENSMUST00000195897 142 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm19658-201ENSMUST00000196231 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44367-201ENSMUST00000196836 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44350-201ENSMUST00000197197 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44390-201ENSMUST00000197533 144 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44313-201ENSMUST00000198018 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44486-201ENSMUST00000198508 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44454-201ENSMUST00000198541 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44314-201ENSMUST00000199263 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44394-201ENSMUST00000199558 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44484-201ENSMUST00000199873 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44466-201ENSMUST00000200264 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm44359-201ENSMUST00000200671 138 ntBASIC17.31■□□□□ 0.36
Col12a1Q60847 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.31■□□□□ 0.36
Col12a1Q60847 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Col12a1Q60847 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Col12a1Q60847 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col12a1Q60847 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Notumos-201ENSMUST00000151998 2659 ntBASIC17.3■□□□□ 0.36
Col12a1Q60847 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Col12a1Q60847 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.3■□□□□ 0.36
Col12a1Q60847 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Col12a1Q60847 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col12a1Q60847 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Col12a1Q60847 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Col12a1Q60847 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.3■□□□□ 0.36
Col12a1Q60847 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.3■□□□□ 0.36
Col12a1Q60847 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Col12a1Q60847 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col12a1Q60847 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col12a1Q60847 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col12a1Q60847 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.29■□□□□ 0.36
Col12a1Q60847 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Col12a1Q60847 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col12a1Q60847 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col12a1Q60847 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col12a1Q60847 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col12a1Q60847 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.28■□□□□ 0.36
Col12a1Q60847 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col12a1Q60847 Gm15372-201ENSMUST00000120729 834 ntBASIC17.28■□□□□ 0.36
Col12a1Q60847 Gm7862-201ENSMUST00000121461 292 ntBASIC17.28■□□□□ 0.36
Col12a1Q60847 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Col12a1Q60847 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col12a1Q60847 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms