Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav7-2Q5R1I3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav7-2Q5R1I3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Gm13148-201ENSMUST00000118892 745 ntBASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Gm26524-201ENSMUST00000192339 390 ntBASIC13□□□□□ -0.33
Trav7-2Q5R1I3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Rab3c-203ENSMUST00000224180 967 ntBASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav7-2Q5R1I3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Gm5408-201ENSMUST00000197998 747 ntBASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7-2Q5R1I3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms