Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav7d-3Q5R1I1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Gm10849-201ENSMUST00000100397 618 ntBASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Gm42569-201ENSMUST00000200539 472 ntBASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav7d-3Q5R1I1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Gm2399-201ENSMUST00000104944 225 ntBASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav7d-3Q5R1I1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav7d-3Q5R1I1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Gm10418-201ENSMUST00000100943 576 ntBASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Gm7291-201ENSMUST00000199147 382 ntBASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7d-3Q5R1I1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7d-3Q5R1I1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms