Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Gm27801-201ENSMUST00000184174 223 ntBASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Gm15820-201ENSMUST00000201566 728 ntBASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav7d-4Q5R1H9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-4Q5R1H9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-4Q5R1H9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav7d-4Q5R1H9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav7d-4Q5R1H9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav7d-4Q5R1H9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav7d-4Q5R1H9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav7d-4Q5R1H9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms