Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm12821-201ENSMUST00000120022 600 ntBASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm6139-201ENSMUST00000079261 882 ntBASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm43060-201ENSMUST00000200621 289 ntBASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav15-1-dv6-1Q5R1D2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms