Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Gm1401-201ENSMUST00000122048 772 ntBASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps13aQ5H8C4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Vps13aQ5H8C4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps13aQ5H8C4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps13aQ5H8C4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Gm12895-201ENSMUST00000122214 226 ntBASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Mir5126-201ENSMUST00000175513 77 ntBASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Gm8000-201ENSMUST00000188378 592 ntBASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.34■□□□□ 0.37
Vps13aQ5H8C4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44357-201ENSMUST00000195897 142 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm19658-201ENSMUST00000196231 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44367-201ENSMUST00000196836 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44350-201ENSMUST00000197197 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44390-201ENSMUST00000197533 144 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44313-201ENSMUST00000198018 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44486-201ENSMUST00000198508 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44454-201ENSMUST00000198541 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44314-201ENSMUST00000199263 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44394-201ENSMUST00000199558 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44484-201ENSMUST00000199873 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44466-201ENSMUST00000200264 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Gm44359-201ENSMUST00000200671 138 ntBASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vps13aQ5H8C4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Vps13aQ5H8C4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps13aQ5H8C4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps13aQ5H8C4 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps13aQ5H8C4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vps13aQ5H8C4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms