Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.82■□□□□ 0.92
Rnf20Q5DTM8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf20Q5DTM8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Rnf20Q5DTM8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf20Q5DTM8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Gm42545-201ENSMUST00000202755 922 ntBASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rnf20Q5DTM8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf20Q5DTM8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf20Q5DTM8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf20Q5DTM8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf20Q5DTM8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf20Q5DTM8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rnf20Q5DTM8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf20Q5DTM8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.77■□□□□ 0.91
Rnf20Q5DTM8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf20Q5DTM8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.76■□□□□ 0.91
Rnf20Q5DTM8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms