Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rc3h1Q4VGL6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Rc3h1Q4VGL6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Mir5130-201ENSMUST00000175160 84 ntBASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h1Q4VGL6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Gm18032-201ENSMUST00000222541 538 ntBASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Rc3h1Q4VGL6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Gm6659-201ENSMUST00000174752 547 ntBASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h1Q4VGL6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Gm7370-201ENSMUST00000219471 767 ntBASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h1Q4VGL6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Gm9731-201ENSMUST00000209480 747 ntBASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h1Q4VGL6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Gm37025-201ENSMUST00000195159 829 ntBASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.15■□□□□ 0.82
Rc3h1Q4VGL6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms