Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Gm10819-201ENSMUST00000099988 561 ntBASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lin28bQ45KJ6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Gm7638-201ENSMUST00000121348 967 ntBASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Gm24841-201ENSMUST00000158676 357 ntBASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Gm23634-201ENSMUST00000175071 91 ntBASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lin28bQ45KJ6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Gm29791-202ENSMUST00000207888 369 ntBASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Gm7367-201ENSMUST00000057611 492 ntBASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lin28bQ45KJ6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lin28bQ45KJ6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lin28bQ45KJ6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lin28bQ45KJ6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lin28bQ45KJ6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Lin28bQ45KJ6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.58■□□□□ 0.25
Lin28bQ45KJ6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Lin28bQ45KJ6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Gm10013-201ENSMUST00000106074 672 ntBASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Gm7791-201ENSMUST00000219066 539 ntBASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lin28bQ45KJ6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms