Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ckap2Q3V1H1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Mir5122-201ENSMUST00000175004 89 ntBASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ckap2Q3V1H1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Gm38027-201ENSMUST00000192315 235 ntBASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ckap2Q3V1H1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ckap2Q3V1H1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Ckap2Q3V1H1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ckap2Q3V1H1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Gm17661-201ENSMUST00000170317 270 ntBASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Gm3375-201ENSMUST00000203929 796 ntBASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ckap2Q3V1H1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20■□□□□ 0.79
Ckap2Q3V1H1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Gm37025-201ENSMUST00000195159 829 ntBASIC20■□□□□ 0.79
Ckap2Q3V1H1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20■□□□□ 0.79
Ckap2Q3V1H1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ckap2Q3V1H1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Gm12085-201ENSMUST00000119263 940 ntBASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.99■□□□□ 0.79
Ckap2Q3V1H1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ckap2Q3V1H1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms