Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cnga4Q3UW12 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Gm43017-201ENSMUST00000198296 752 ntBASIC17.79■□□□□ 0.44
Cnga4Q3UW12 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cnga4Q3UW12 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Gm27454-201ENSMUST00000185090 204 ntBASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cnga4Q3UW12 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.77■□□□□ 0.44
Cnga4Q3UW12 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Cnga4Q3UW12 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cnga4Q3UW12 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cnga4Q3UW12 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms