Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Znf48Q3US17 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.41□□□□□ -0.1
Znf48Q3US17 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.41□□□□□ -0.1
Znf48Q3US17 Gm10231-201ENSMUST00000181584 441 ntBASIC14.41□□□□□ -0.1
Znf48Q3US17 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Gm19891-201ENSMUST00000189771 303 ntBASIC14.41□□□□□ -0.1
Znf48Q3US17 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.41□□□□□ -0.1
Znf48Q3US17 Gm10175-202ENSMUST00000208752 441 ntBASIC14.41□□□□□ -0.1
Znf48Q3US17 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Znf48Q3US17 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Gm5417-201ENSMUST00000079706 384 ntBASIC14.41□□□□□ -0.1
Znf48Q3US17 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Znf48Q3US17 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Znf48Q3US17 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Znf48Q3US17 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Gm6433-201ENSMUST00000118634 875 ntBASIC14.4□□□□□ -0.1
Znf48Q3US17 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.4□□□□□ -0.1
Znf48Q3US17 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Znf48Q3US17 Mir5122-201ENSMUST00000175004 89 ntBASIC14.4□□□□□ -0.1
Znf48Q3US17 Gm43799-201ENSMUST00000201845 579 ntBASIC14.4□□□□□ -0.1
Znf48Q3US17 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.4□□□□□ -0.1
Znf48Q3US17 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Gm10819-201ENSMUST00000099988 561 ntBASIC14.4□□□□□ -0.1
Znf48Q3US17 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Znf48Q3US17 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Znf48Q3US17 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.4□□□□□ -0.1
Znf48Q3US17 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Znf48Q3US17 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Znf48Q3US17 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Znf48Q3US17 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.39□□□□□ -0.11
Znf48Q3US17 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Znf48Q3US17 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.39□□□□□ -0.11
Znf48Q3US17 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Znf48Q3US17 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Znf48Q3US17 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.39□□□□□ -0.11
Znf48Q3US17 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.39□□□□□ -0.11
Znf48Q3US17 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.39□□□□□ -0.11
Znf48Q3US17 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.39□□□□□ -0.11
Znf48Q3US17 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Znf48Q3US17 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Znf48Q3US17 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.38□□□□□ -0.11
Znf48Q3US17 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Znf48Q3US17 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.38□□□□□ -0.11
Znf48Q3US17 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Znf48Q3US17 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms