Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smcr8Q3UMB5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gm10418-201ENSMUST00000100943 576 ntBASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gm38027-201ENSMUST00000192315 235 ntBASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smcr8Q3UMB5 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.77■□□□□ 0.59
Smcr8Q3UMB5 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smcr8Q3UMB5 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smcr8Q3UMB5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smcr8Q3UMB5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Gm13401-201ENSMUST00000117074 291 ntBASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Gm18959-201ENSMUST00000208954 655 ntBASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smcr8Q3UMB5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Fst-202ENSMUST00000223640 2612 ntBASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smcr8Q3UMB5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms