Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Carmil3Q3UFQ8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Carmil3Q3UFQ8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Carmil3Q3UFQ8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Carmil3Q3UFQ8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Gm9013-201ENSMUST00000132939 882 ntBASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Carmil3Q3UFQ8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.06■□□□□ 0.96
Carmil3Q3UFQ8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Carmil3Q3UFQ8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Gm7213-201ENSMUST00000215977 950 ntBASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Carmil3Q3UFQ8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Carmil3Q3UFQ8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Carmil3Q3UFQ8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Carmil3Q3UFQ8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Carmil3Q3UFQ8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Carmil3Q3UFQ8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil3Q3UFQ8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Carmil3Q3UFQ8 Idnk-204ENSMUST00000226010 1898 ntBASIC21■□□□□ 0.95
Carmil3Q3UFQ8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms