Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.05□□□□□ -0.48
Cops9Q3U898 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cops9Q3U898 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops9Q3U898 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops9Q3U898 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cops9Q3U898 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.05□□□□□ -0.48
Cops9Q3U898 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cops9Q3U898 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cops9Q3U898 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
Cops9Q3U898 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.04□□□□□ -0.48
Cops9Q3U898 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cops9Q3U898 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Cops9Q3U898 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cops9Q3U898 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cops9Q3U898 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cops9Q3U898 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cops9Q3U898 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cops9Q3U898 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cops9Q3U898 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.03□□□□□ -0.48
Cops9Q3U898 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cops9Q3U898 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.02□□□□□ -0.48
Cops9Q3U898 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Cops9Q3U898 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops9Q3U898 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.02□□□□□ -0.48
Cops9Q3U898 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops9Q3U898 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cops9Q3U898 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops9Q3U898 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cops9Q3U898 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cops9Q3U898 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.02□□□□□ -0.49
Cops9Q3U898 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.02□□□□□ -0.49
Cops9Q3U898 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cops9Q3U898 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cops9Q3U898 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cops9Q3U898 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.02□□□□□ -0.49
Cops9Q3U898 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.02□□□□□ -0.49
Cops9Q3U898 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cops9Q3U898 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cops9Q3U898 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cops9Q3U898 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cops9Q3U898 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.01□□□□□ -0.49
Cops9Q3U898 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cops9Q3U898 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms