Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smim6Q3U0I6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smim6Q3U0I6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smim6Q3U0I6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smim6Q3U0I6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smim6Q3U0I6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smim6Q3U0I6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.58□□□□□ -0.23
Smim6Q3U0I6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smim6Q3U0I6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Gm15820-201ENSMUST00000201566 728 ntBASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.58□□□□□ -0.24
Smim6Q3U0I6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Gm38205-201ENSMUST00000192243 258 ntBASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.57□□□□□ -0.24
Smim6Q3U0I6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smim6Q3U0I6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms