Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Khdc4Q3TCX3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Gm6433-201ENSMUST00000118634 875 ntBASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Khdc4Q3TCX3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Rarb-207ENSMUST00000225921 2756 ntBASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Gm30025-201ENSMUST00000218555 728 ntBASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Khdc4Q3TCX3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Gm37292-201ENSMUST00000192062 758 ntBASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.61■□□□□ 0.25
Khdc4Q3TCX3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Khdc4Q3TCX3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Gm12382-201ENSMUST00000122005 922 ntBASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.59■□□□□ 0.25
Khdc4Q3TCX3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms