Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Gm5364-201ENSMUST00000216789 889 ntBASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col19a1Q0VF58 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Gm6296-201ENSMUST00000222599 943 ntBASIC18.65■□□□□ 0.58
Col19a1Q0VF58 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col19a1Q0VF58 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Gm5264-201ENSMUST00000190584 848 ntBASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Gm6376-201ENSMUST00000209407 580 ntBASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col19a1Q0VF58 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Gm11779-201ENSMUST00000118541 368 ntBASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Gm7862-201ENSMUST00000121461 292 ntBASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col19a1Q0VF58 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Gm15372-201ENSMUST00000120729 834 ntBASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col19a1Q0VF58 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Col19a1Q0VF58 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.6■□□□□ 0.57
Col19a1Q0VF58 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col19a1Q0VF58 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col19a1Q0VF58 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col19a1Q0VF58 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col19a1Q0VF58 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Col19a1Q0VF58 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col19a1Q0VF58 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms