Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ptchd3Q0EEE2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ptchd3Q0EEE2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Gm27405-201ENSMUST00000184201 112 ntBASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ptchd3Q0EEE2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.85■□□□□ 0.29
Ptchd3Q0EEE2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Gm6365-201ENSMUST00000054711 744 ntBASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ptchd3Q0EEE2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms