Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Chd8Q09XV5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Chd8Q09XV5 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.69■□□□□ 0.1
Chd8Q09XV5 Gm25857-201ENSMUST00000082788 129 ntBASIC15.69■□□□□ 0.1
Chd8Q09XV5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Chd8Q09XV5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Rprl3-201ENSMUST00000157400 290 ntBASIC15.68■□□□□ 0.1
Chd8Q09XV5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.68■□□□□ 0.1
Chd8Q09XV5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Gm13823-201ENSMUST00000119930 345 ntBASIC15.68■□□□□ 0.1
Chd8Q09XV5 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.68■□□□□ 0.1
Chd8Q09XV5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chd8Q09XV5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chd8Q09XV5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd8Q09XV5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chd8Q09XV5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Chd8Q09XV5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chd8Q09XV5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.67■□□□□ 0.1
Chd8Q09XV5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chd8Q09XV5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.66■□□□□ 0.1
Chd8Q09XV5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.66■□□□□ 0.1
Chd8Q09XV5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chd8Q09XV5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chd8Q09XV5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms