Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.43■□□□□ 0.7
Ssrp1Q08943 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.43■□□□□ 0.7
Ssrp1Q08943 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ssrp1Q08943 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Gm13158-201ENSMUST00000122007 736 ntBASIC19.42■□□□□ 0.7
Ssrp1Q08943 Gm27275-201ENSMUST00000184318 272 ntBASIC19.42■□□□□ 0.7
Ssrp1Q08943 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssrp1Q08943 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.41■□□□□ 0.7
Ssrp1Q08943 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Gm11643-201ENSMUST00000119578 864 ntBASIC19.41■□□□□ 0.7
Ssrp1Q08943 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Mir8112-201ENSMUST00000184382 131 ntBASIC19.41■□□□□ 0.7
Ssrp1Q08943 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssrp1Q08943 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Gm13401-201ENSMUST00000117074 291 ntBASIC19.4■□□□□ 0.7
Ssrp1Q08943 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssrp1Q08943 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.39■□□□□ 0.7
Ssrp1Q08943 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ssrp1Q08943 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ssrp1Q08943 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ssrp1Q08943 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssrp1Q08943 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssrp1Q08943 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ssrp1Q08943 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssrp1Q08943 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssrp1Q08943 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ssrp1Q08943 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms