Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdx4Q07424 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Cdx4Q07424 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdx4Q07424 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Dio3-201ENSMUST00000097228 1449 ntBASIC13.51□□□□□ -0.25
Cdx4Q07424 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdx4Q07424 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdx4Q07424 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Cdx4Q07424 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdx4Q07424 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdx4Q07424 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdx4Q07424 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdx4Q07424 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdx4Q07424 Gm2399-201ENSMUST00000104944 225 ntBASIC13.5□□□□□ -0.25
Cdx4Q07424 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.5□□□□□ -0.25
Cdx4Q07424 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.5□□□□□ -0.25
Cdx4Q07424 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.5□□□□□ -0.25
Cdx4Q07424 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdx4Q07424 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdx4Q07424 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.49□□□□□ -0.25
Cdx4Q07424 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdx4Q07424 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdx4Q07424 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Cdx4Q07424 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdx4Q07424 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdx4Q07424 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.48□□□□□ -0.25
Cdx4Q07424 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdx4Q07424 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Flg-201ENSMUST00000050758 1488 ntBASIC13.48□□□□□ -0.25
Cdx4Q07424 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdx4Q07424 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms