Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.04□□□□□ -0.48
PrkdcP97313 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PrkdcP97313 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
PrkdcP97313 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.03□□□□□ -0.48
PrkdcP97313 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
PrkdcP97313 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.03□□□□□ -0.48
PrkdcP97313 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PrkdcP97313 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.03□□□□□ -0.48
PrkdcP97313 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
PrkdcP97313 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.03□□□□□ -0.48
PrkdcP97313 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.03□□□□□ -0.48
PrkdcP97313 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.03□□□□□ -0.48
PrkdcP97313 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.03□□□□□ -0.48
PrkdcP97313 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.03□□□□□ -0.48
PrkdcP97313 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PrkdcP97313 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
PrkdcP97313 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PrkdcP97313 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
PrkdcP97313 Golph3-205ENSMUST00000228671 2842 ntBASIC12.02□□□□□ -0.48
PrkdcP97313 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
PrkdcP97313 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PrkdcP97313 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PrkdcP97313 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PrkdcP97313 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PrkdcP97313 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PrkdcP97313 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PrkdcP97313 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PrkdcP97313 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.02□□□□□ -0.49
PrkdcP97313 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
PrkdcP97313 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.02□□□□□ -0.49
PrkdcP97313 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.49
PrkdcP97313 Gm37025-201ENSMUST00000195159 829 ntBASIC12.02□□□□□ -0.49
PrkdcP97313 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.02□□□□□ -0.49
PrkdcP97313 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
PrkdcP97313 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PrkdcP97313 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PrkdcP97313 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.01□□□□□ -0.49
PrkdcP97313 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.01□□□□□ -0.49
PrkdcP97313 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.01□□□□□ -0.49
PrkdcP97313 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC12.01□□□□□ -0.49
PrkdcP97313 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.01□□□□□ -0.49
PrkdcP97313 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
PrkdcP97313 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.01□□□□□ -0.49
PrkdcP97313 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.01□□□□□ -0.49
PrkdcP97313 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PrkdcP97313 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Gm34220-201ENSMUST00000223001 2709 ntBASIC12□□□□□ -0.49
PrkdcP97313 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 H2af-ps-201ENSMUST00000119066 295 ntBASIC12□□□□□ -0.49
PrkdcP97313 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12□□□□□ -0.49
PrkdcP97313 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
PrkdcP97313 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12□□□□□ -0.49
PrkdcP97313 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12□□□□□ -0.49
PrkdcP97313 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
PrkdcP97313 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms