Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgb1P63158 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgb1P63158 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.21■□□□□ 0.67
Hmgb1P63158 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgb1P63158 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgb1P63158 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.21■□□□□ 0.67
Hmgb1P63158 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Hmgb1P63158 Gm10138-203ENSMUST00000206952 366 ntBASIC19.21■□□□□ 0.67
Hmgb1P63158 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgb1P63158 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hmgb1P63158 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hmgb1P63158 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgb1P63158 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgb1P63158 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgb1P63158 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgb1P63158 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Gm11643-201ENSMUST00000119578 864 ntBASIC19.2■□□□□ 0.66
Hmgb1P63158 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.2■□□□□ 0.66
Hmgb1P63158 Mtag2-201ENSMUST00000058665 714 ntBASIC19.2■□□□□ 0.66
Hmgb1P63158 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmgb1P63158 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.2■□□□□ 0.66
Hmgb1P63158 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmgb1P63158 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgb1P63158 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Hmgb1P63158 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmgb1P63158 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.19■□□□□ 0.66
Hmgb1P63158 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.19■□□□□ 0.66
Hmgb1P63158 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Hmgb1P63158 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.19■□□□□ 0.66
Hmgb1P63158 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Hmgb1P63158 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hmgb1P63158 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hmgb1P63158 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgb1P63158 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.18■□□□□ 0.66
Hmgb1P63158 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.18■□□□□ 0.66
Hmgb1P63158 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hmgb1P63158 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgb1P63158 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.17■□□□□ 0.66
Hmgb1P63158 Dio3-201ENSMUST00000097228 1449 ntBASIC19.17■□□□□ 0.66
Hmgb1P63158 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hmgb1P63158 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.17■□□□□ 0.66
Hmgb1P63158 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.17■□□□□ 0.66
Hmgb1P63158 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.17■□□□□ 0.66
Hmgb1P63158 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.17■□□□□ 0.66
Hmgb1P63158 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Hmgb1P63158 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgb1P63158 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgb1P63158 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgb1P63158 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgb1P63158 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.16■□□□□ 0.66
Hmgb1P63158 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgb1P63158 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgb1P63158 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms