Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ThraP63058 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.68■□□□□ 0.42
ThraP63058 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ThraP63058 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ThraP63058 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.67■□□□□ 0.42
ThraP63058 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.67■□□□□ 0.42
ThraP63058 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ThraP63058 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.67■□□□□ 0.42
ThraP63058 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ThraP63058 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ThraP63058 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.66■□□□□ 0.42
ThraP63058 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.66■□□□□ 0.42
ThraP63058 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.66■□□□□ 0.42
ThraP63058 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ThraP63058 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.66■□□□□ 0.42
ThraP63058 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ThraP63058 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ThraP63058 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ThraP63058 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.65■□□□□ 0.42
ThraP63058 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.65■□□□□ 0.42
ThraP63058 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ThraP63058 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.65■□□□□ 0.42
ThraP63058 Gm13836-201ENSMUST00000121159 501 ntBASIC17.65■□□□□ 0.42
ThraP63058 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.65■□□□□ 0.42
ThraP63058 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ThraP63058 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.65■□□□□ 0.42
ThraP63058 Gm7977-201ENSMUST00000193787 748 ntBASIC17.65■□□□□ 0.42
ThraP63058 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ThraP63058 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.65■□□□□ 0.42
ThraP63058 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ThraP63058 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ThraP63058 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.64■□□□□ 0.41
ThraP63058 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ThraP63058 Gm37055-201ENSMUST00000191866 133 ntBASIC17.64■□□□□ 0.41
ThraP63058 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.64■□□□□ 0.41
ThraP63058 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.64■□□□□ 0.41
ThraP63058 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ThraP63058 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.63■□□□□ 0.41
ThraP63058 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ThraP63058 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms