Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Sec61a1P61620 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.4■□□□□ 0.06
Sec61a1P61620 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.4■□□□□ 0.06
Sec61a1P61620 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.4■□□□□ 0.06
Sec61a1P61620 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sec61a1P61620 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.4■□□□□ 0.06
Sec61a1P61620 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.39■□□□□ 0.05
Sec61a1P61620 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Sec61a1P61620 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Sec61a1P61620 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Sec61a1P61620 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Sec61a1P61620 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.38■□□□□ 0.05
Sec61a1P61620 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.38■□□□□ 0.05
Sec61a1P61620 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.38■□□□□ 0.05
Sec61a1P61620 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.38■□□□□ 0.05
Sec61a1P61620 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Sec61a1P61620 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Sec61a1P61620 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.37■□□□□ 0.05
Sec61a1P61620 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.37■□□□□ 0.05
Sec61a1P61620 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sec61a1P61620 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Gm10653-202ENSMUST00000139570 835 ntBASIC15.36■□□□□ 0.05
Sec61a1P61620 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.36■□□□□ 0.05
Sec61a1P61620 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.36■□□□□ 0.05
Sec61a1P61620 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sec61a1P61620 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.35■□□□□ 0.05
Sec61a1P61620 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sec61a1P61620 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms