Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.03■□□□□ 0.32
Cdh5P55284 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.03■□□□□ 0.32
Cdh5P55284 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdh5P55284 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdh5P55284 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdh5P55284 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh5P55284 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdh5P55284 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cdh5P55284 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdh5P55284 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cdh5P55284 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cdh5P55284 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.02■□□□□ 0.32
Cdh5P55284 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh5P55284 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh5P55284 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Cdh5P55284 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh5P55284 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh5P55284 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdh5P55284 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdh5P55284 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdh5P55284 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.01■□□□□ 0.31
Cdh5P55284 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cdh5P55284 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.01■□□□□ 0.31
Cdh5P55284 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.01■□□□□ 0.31
Cdh5P55284 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh5P55284 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdh5P55284 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdh5P55284 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdh5P55284 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Cdh5P55284 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Gm20760-201ENSMUST00000179197 648 ntBASIC17■□□□□ 0.31
Cdh5P55284 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdh5P55284 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh5P55284 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdh5P55284 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdh5P55284 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.99■□□□□ 0.31
Cdh5P55284 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh5P55284 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh5P55284 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh5P55284 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cdh5P55284 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh5P55284 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdh5P55284 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh5P55284 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh5P55284 Gm37856-201ENSMUST00000191634 999 ntBASIC16.98■□□□□ 0.31
Cdh5P55284 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.98■□□□□ 0.31
Cdh5P55284 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh5P55284 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh5P55284 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms