Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdkn2bP55271 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.77■□□□□ 0.28
Cdkn2bP55271 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Gm13401-201ENSMUST00000117074 291 ntBASIC16.77■□□□□ 0.28
Cdkn2bP55271 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdkn2bP55271 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cdkn2bP55271 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdkn2bP55271 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdkn2bP55271 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cdkn2bP55271 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdkn2bP55271 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdkn2bP55271 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Flg-201ENSMUST00000050758 1488 ntBASIC16.76■□□□□ 0.27
Cdkn2bP55271 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Gm10849-201ENSMUST00000100397 618 ntBASIC16.76■□□□□ 0.27
Cdkn2bP55271 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdkn2bP55271 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkn2bP55271 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdkn2bP55271 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdkn2bP55271 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkn2bP55271 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Gm26524-201ENSMUST00000192339 390 ntBASIC16.74■□□□□ 0.27
Cdkn2bP55271 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdkn2bP55271 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdkn2bP55271 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
Cdkn2bP55271 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.73■□□□□ 0.27
Cdkn2bP55271 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.72■□□□□ 0.27
Cdkn2bP55271 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cdkn2bP55271 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms