Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Atxn1P54254 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Atxn1P54254 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Atxn1P54254 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.32■□□□□ 0.36
Atxn1P54254 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Atxn1P54254 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.32■□□□□ 0.36
Atxn1P54254 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Atxn1P54254 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Atxn1P54254 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Atxn1P54254 Gm5587-201ENSMUST00000206270 674 ntBASIC17.31■□□□□ 0.36
Atxn1P54254 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.31■□□□□ 0.36
Atxn1P54254 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.31■□□□□ 0.36
Atxn1P54254 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atxn1P54254 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.3■□□□□ 0.36
Atxn1P54254 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.3■□□□□ 0.36
Atxn1P54254 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atxn1P54254 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.3■□□□□ 0.36
Atxn1P54254 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Atxn1P54254 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atxn1P54254 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atxn1P54254 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atxn1P54254 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.29■□□□□ 0.36
Atxn1P54254 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atxn1P54254 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.29■□□□□ 0.36
Atxn1P54254 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atxn1P54254 Gm29518-201ENSMUST00000190858 372 ntBASIC17.29■□□□□ 0.36
Atxn1P54254 Gm38027-201ENSMUST00000192315 235 ntBASIC17.29■□□□□ 0.36
Atxn1P54254 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atxn1P54254 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atxn1P54254 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Atxn1P54254 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atxn1P54254 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atxn1P54254 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atxn1P54254 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atxn1P54254 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atxn1P54254 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atxn1P54254 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atxn1P54254 Gm18958-201ENSMUST00000174258 762 ntBASIC17.28■□□□□ 0.36
Atxn1P54254 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Atxn1P54254 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Atxn1P54254 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atxn1P54254 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atxn1P54254 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.27■□□□□ 0.36
Atxn1P54254 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atxn1P54254 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.27■□□□□ 0.36
Atxn1P54254 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.27■□□□□ 0.36
Atxn1P54254 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atxn1P54254 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atxn1P54254 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atxn1P54254 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms