Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm44549-201ENSMUST00000208351 577 ntBASIC19.48■□□□□ 0.71
Nek1P51954 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.48■□□□□ 0.71
Nek1P51954 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Nek1P51954 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.48■□□□□ 0.71
Nek1P51954 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nek1P51954 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
Nek1P51954 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nek1P51954 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nek1P51954 Mir8112-201ENSMUST00000184382 131 ntBASIC19.47■□□□□ 0.71
Nek1P51954 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Nek1P51954 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.47■□□□□ 0.71
Nek1P51954 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.46■□□□□ 0.71
Nek1P51954 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nek1P51954 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.46■□□□□ 0.71
Nek1P51954 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.46■□□□□ 0.71
Nek1P51954 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.46■□□□□ 0.71
Nek1P51954 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.46■□□□□ 0.71
Nek1P51954 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nek1P51954 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.46■□□□□ 0.71
Nek1P51954 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nek1P51954 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nek1P51954 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.46■□□□□ 0.71
Nek1P51954 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nek1P51954 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.45■□□□□ 0.7
Nek1P51954 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.45■□□□□ 0.7
Nek1P51954 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.45■□□□□ 0.7
Nek1P51954 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.45■□□□□ 0.7
Nek1P51954 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.45■□□□□ 0.7
Nek1P51954 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nek1P51954 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Nek1P51954 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
Nek1P51954 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.44■□□□□ 0.7
Nek1P51954 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.44■□□□□ 0.7
Nek1P51954 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.44■□□□□ 0.7
Nek1P51954 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.44■□□□□ 0.7
Nek1P51954 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.44■□□□□ 0.7
Nek1P51954 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nek1P51954 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Nek1P51954 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.43■□□□□ 0.7
Nek1P51954 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nek1P51954 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Nek1P51954 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nek1P51954 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nek1P51954 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nek1P51954 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nek1P51954 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms