Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GdnfP48540 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GdnfP48540 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GdnfP48540 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GdnfP48540 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GdnfP48540 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Haglr-201ENSMUST00000100000 2085 ntBASIC15.3■□□□□ 0.04
GdnfP48540 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GdnfP48540 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GdnfP48540 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GdnfP48540 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.3■□□□□ 0.04
GdnfP48540 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.3■□□□□ 0.04
GdnfP48540 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Gm6365-201ENSMUST00000054711 744 ntBASIC15.3■□□□□ 0.04
GdnfP48540 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GdnfP48540 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GdnfP48540 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GdnfP48540 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
GdnfP48540 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.29■□□□□ 0.04
GdnfP48540 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
GdnfP48540 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.29■□□□□ 0.04
GdnfP48540 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.29■□□□□ 0.04
GdnfP48540 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GdnfP48540 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GdnfP48540 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GdnfP48540 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.29■□□□□ 0.04
GdnfP48540 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.28■□□□□ 0.04
GdnfP48540 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GdnfP48540 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
GdnfP48540 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.28■□□□□ 0.04
GdnfP48540 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GdnfP48540 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.28■□□□□ 0.04
GdnfP48540 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.28■□□□□ 0.04
GdnfP48540 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GdnfP48540 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GdnfP48540 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GdnfP48540 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
GdnfP48540 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GdnfP48540 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.27■□□□□ 0.04
GdnfP48540 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.27■□□□□ 0.04
GdnfP48540 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GdnfP48540 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GdnfP48540 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GdnfP48540 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.27■□□□□ 0.03
GdnfP48540 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GdnfP48540 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GdnfP48540 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GdnfP48540 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms