Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gli1P47806 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gli1P47806 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.06■□□□□ 0.32
Gli1P47806 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gli1P47806 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Rab3c-203ENSMUST00000224180 967 ntBASIC17.06■□□□□ 0.32
Gli1P47806 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Gli1P47806 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.06■□□□□ 0.32
Gli1P47806 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gli1P47806 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli1P47806 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli1P47806 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli1P47806 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.05■□□□□ 0.32
Gli1P47806 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.05■□□□□ 0.32
Gli1P47806 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli1P47806 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli1P47806 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli1P47806 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gli1P47806 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Gli1P47806 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gli1P47806 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gli1P47806 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Gm26524-201ENSMUST00000192339 390 ntBASIC17.04■□□□□ 0.32
Gli1P47806 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.04■□□□□ 0.32
Gli1P47806 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Gli1P47806 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Gli1P47806 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gli1P47806 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Gli1P47806 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gli1P47806 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Gli1P47806 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Gli1P47806 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gli1P47806 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.03■□□□□ 0.32
Gli1P47806 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.03■□□□□ 0.32
Gli1P47806 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Gli1P47806 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Gli1P47806 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.03■□□□□ 0.32
Gli1P47806 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gli1P47806 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Gli1P47806 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Gli1P47806 Gm27275-201ENSMUST00000184318 272 ntBASIC17.02■□□□□ 0.32
Gli1P47806 Gm7977-201ENSMUST00000193787 748 ntBASIC17.02■□□□□ 0.32
Gli1P47806 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gli1P47806 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Gli1P47806 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gli1P47806 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.02■□□□□ 0.31
Gli1P47806 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gli1P47806 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gli1P47806 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gli1P47806 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gli1P47806 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.01■□□□□ 0.31
Gli1P47806 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gli1P47806 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms