Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox18P43680 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox18P43680 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.72■□□□□ 0.27
Sox18P43680 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sox18P43680 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.72■□□□□ 0.27
Sox18P43680 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Gm11355-201ENSMUST00000121120 306 ntBASIC16.72■□□□□ 0.27
Sox18P43680 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Sox18P43680 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.72■□□□□ 0.27
Sox18P43680 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.72■□□□□ 0.27
Sox18P43680 Gm34391-201ENSMUST00000203706 907 ntBASIC16.72■□□□□ 0.27
Sox18P43680 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Sox18P43680 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Sox18P43680 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox18P43680 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.71■□□□□ 0.27
Sox18P43680 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sox18P43680 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.71■□□□□ 0.27
Sox18P43680 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.71■□□□□ 0.27
Sox18P43680 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sox18P43680 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.71■□□□□ 0.27
Sox18P43680 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox18P43680 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sox18P43680 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Sox18P43680 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
Sox18P43680 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Sox18P43680 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sox18P43680 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.7■□□□□ 0.26
Sox18P43680 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox18P43680 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sox18P43680 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.7■□□□□ 0.26
Sox18P43680 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Gm7638-201ENSMUST00000121348 967 ntBASIC16.7■□□□□ 0.26
Sox18P43680 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.7■□□□□ 0.26
Sox18P43680 Gm27742-201ENSMUST00000184667 60 ntBASIC16.7■□□□□ 0.26
Sox18P43680 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.7■□□□□ 0.26
Sox18P43680 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox18P43680 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox18P43680 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.69■□□□□ 0.26
Sox18P43680 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox18P43680 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox18P43680 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox18P43680 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Sox18P43680 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.69■□□□□ 0.26
Sox18P43680 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox18P43680 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox18P43680 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms