Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hist1h1aP43275 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.42□□□□□ -0.1
Hist1h1aP43275 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Gm10033-202ENSMUST00000211874 928 ntBASIC14.42□□□□□ -0.1
Hist1h1aP43275 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hist1h1aP43275 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.41□□□□□ -0.1
Hist1h1aP43275 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hist1h1aP43275 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Gm42642-201ENSMUST00000200683 355 ntBASIC14.4□□□□□ -0.1
Hist1h1aP43275 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hist1h1aP43275 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hist1h1aP43275 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms