Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Msh2P43247 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.01■□□□□ 0.47
Msh2P43247 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.01■□□□□ 0.47
Msh2P43247 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Msh2P43247 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.01■□□□□ 0.47
Msh2P43247 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.01■□□□□ 0.47
Msh2P43247 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.01■□□□□ 0.47
Msh2P43247 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.01■□□□□ 0.47
Msh2P43247 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Msh2P43247 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Msh2P43247 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh2P43247 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Msh2P43247 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh2P43247 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18■□□□□ 0.47
Msh2P43247 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh2P43247 Gm44672-201ENSMUST00000206944 1098 ntBASIC18■□□□□ 0.47
Msh2P43247 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Msh2P43247 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18■□□□□ 0.47
Msh2P43247 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Msh2P43247 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Msh2P43247 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18■□□□□ 0.47
Msh2P43247 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Msh2P43247 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Msh2P43247 Gm12441-201ENSMUST00000121806 588 ntBASIC17.99■□□□□ 0.47
Msh2P43247 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.99■□□□□ 0.47
Msh2P43247 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.99■□□□□ 0.47
Msh2P43247 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Msh2P43247 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Msh2P43247 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.98■□□□□ 0.47
Msh2P43247 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Msh2P43247 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.98■□□□□ 0.47
Msh2P43247 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Msh2P43247 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Msh2P43247 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Msh2P43247 Gm22325-201ENSMUST00000158904 308 ntBASIC17.98■□□□□ 0.47
Msh2P43247 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Msh2P43247 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Msh2P43247 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Msh2P43247 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Msh2P43247 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh2P43247 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Msh2P43247 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.97■□□□□ 0.47
Msh2P43247 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.97■□□□□ 0.47
Msh2P43247 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.97■□□□□ 0.47
Msh2P43247 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh2P43247 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh2P43247 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Msh2P43247 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Msh2P43247 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Msh2P43247 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Msh2P43247 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Msh2P43247 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.96■□□□□ 0.47
Msh2P43247 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Msh2P43247 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Msh2P43247 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms