Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.16■□□□□ 0.18
Thbs1P35441 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Gm20049-201ENSMUST00000219950 730 ntBASIC16.16■□□□□ 0.18
Thbs1P35441 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.16■□□□□ 0.18
Thbs1P35441 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Thbs1P35441 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Thbs1P35441 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.16■□□□□ 0.18
Thbs1P35441 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Thbs1P35441 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Thbs1P35441 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Thbs1P35441 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Gm13158-201ENSMUST00000122007 736 ntBASIC16.15■□□□□ 0.18
Thbs1P35441 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.15■□□□□ 0.18
Thbs1P35441 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Thbs1P35441 Gm8520-201ENSMUST00000186517 868 ntBASIC16.15■□□□□ 0.18
Thbs1P35441 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.15■□□□□ 0.18
Thbs1P35441 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Thbs1P35441 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Thbs1P35441 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Thbs1P35441 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Thbs1P35441 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Thbs1P35441 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Thbs1P35441 Gm22240-201ENSMUST00000175225 82 ntBASIC16.14■□□□□ 0.17
Thbs1P35441 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.14■□□□□ 0.17
Thbs1P35441 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Thbs1P35441 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thbs1P35441 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.13■□□□□ 0.17
Thbs1P35441 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Thbs1P35441 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thbs1P35441 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Thbs1P35441 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.12■□□□□ 0.17
Thbs1P35441 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.12■□□□□ 0.17
Thbs1P35441 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thbs1P35441 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Thbs1P35441 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.11■□□□□ 0.17
Thbs1P35441 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Thbs1P35441 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.11■□□□□ 0.17
Thbs1P35441 Gm6576-201ENSMUST00000169678 883 ntBASIC16.11■□□□□ 0.17
Thbs1P35441 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Thbs1P35441 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Thbs1P35441 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.11■□□□□ 0.17
Thbs1P35441 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thbs1P35441 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms