Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.91■□□□□ 0.46
Mmp13P33435 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Mmp13P33435 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Mmp13P33435 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mmp13P33435 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.9■□□□□ 0.46
Mmp13P33435 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Mmp13P33435 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.9■□□□□ 0.46
Mmp13P33435 Gm20049-201ENSMUST00000219950 730 ntBASIC17.9■□□□□ 0.46
Mmp13P33435 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.9■□□□□ 0.46
Mmp13P33435 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mmp13P33435 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Mmp13P33435 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.89■□□□□ 0.45
Mmp13P33435 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Mmp13P33435 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Mmp13P33435 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.89■□□□□ 0.45
Mmp13P33435 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Mmp13P33435 Gm10653-202ENSMUST00000139570 835 ntBASIC17.89■□□□□ 0.45
Mmp13P33435 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.89■□□□□ 0.45
Mmp13P33435 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mmp13P33435 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Mmp13P33435 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Mmp13P33435 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Mmp13P33435 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.88■□□□□ 0.45
Mmp13P33435 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Mmp13P33435 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Mmp13P33435 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Mmp13P33435 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Mmp13P33435 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mmp13P33435 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Mmp13P33435 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Mmp13P33435 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.87■□□□□ 0.45
Mmp13P33435 Gm12527-201ENSMUST00000117967 564 ntBASIC17.87■□□□□ 0.45
Mmp13P33435 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Mmp13P33435 Gm2559-201ENSMUST00000201323 363 ntBASIC17.87■□□□□ 0.45
Mmp13P33435 Gm44549-201ENSMUST00000208351 577 ntBASIC17.87■□□□□ 0.45
Mmp13P33435 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.87■□□□□ 0.45
Mmp13P33435 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.87■□□□□ 0.45
Mmp13P33435 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Mmp13P33435 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Gm20760-201ENSMUST00000179197 648 ntBASIC17.86■□□□□ 0.45
Mmp13P33435 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.86■□□□□ 0.45
Mmp13P33435 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mmp13P33435 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms